Protein Information

Protein ZmOrphan105
ZmOrphan105 is a protein in the Orphans family.
Information
Orphans Name:	ZmOrphan105
Species:	Maize
Orphans Family:	Orphans
Gene Name(Synonym):
Uniprot ID:	B4FJ50

Overview of domains present in v5 transcripts
	PF08879
Zm00001eb047020_T001

Gene ID	Type	Sequence	FIMO	Position
Zm00001d032837	DAPseq	sequence	fimo	position
Zm00001d032837	DAPseq	sequence	fimo	position
Zm00001d032837	ChIPseq	sequence	fimo	position
Zm00001d032837	PChIPseq	sequence	fimo	position

Zm00001eb047020_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MRIRKSASRLLGSAYSASAAPTVDAAPRLDLLPPPHPAPCSAPESCGGSAFSSPSVSTAEPCELSRSPWDLIADLSLSDK
KVEDELVDKYFVHVTTRASWLFSSTVSATTSTKKKKKLPAAVYEDSTQLRREAAKKTATNREEGETKKKAKVKKEEVQQD
GAAAAAAQVWKCKKNDGRRWHCNRPVSQPNTLCEYHFVQKRSYLNPGFEFHSTAELEGAAPAPAPVHAASSKLSTSNKPR
KKKKPGNDFSATEGFYYYAGFGPFRTKRQCRSGGTNEPLPAKQEEEEETPEYASHHTEEEEKEAKVAGFTNQAASQDDVS
SCDDDIAGIAGVDEESSDGDYDGIGLGGCNVDGAADPQASIGEVRRKAPWKRWRKPVKARSLKSLM

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF08879
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Nucleotide Sequence
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ACCCGTCACCCTCTCTCGTTCATTT...

GRMZM2G001592_T01 from maize genome v3

Related TFome: pUT5316

Amino Acid Sequence
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MRIRKSASRLLGSAYSASAAPTVDAAPRLDLLPPPHPAPCSAPESCGGSAFSSPSVSTAEPCELSRSPWDLIADLSLSDK
KVEDELVDKYFVHVTTRASWLFSSTVSATTSTKKKKKLPAAVYEDSTQLRREAAKKTATNREEGETKKKAKVKKEEVQQD
GAAAAAAQVWKCKKNDGRRWHCNRPVSQPNTLCEYHFVQKRSYLNPGFEFHSTAELEGAAPAPAPVHAASSKLSTSNKPR
KKKKPGNDFSATEGFYYYAGFGPFRTKRQCRSGGTNEPLPAKQEEEEETPEYASHHTEEEEKEAKVAGFTNQAASQDDVS
SCDDDIAGIAGVDEESSDGDYDGIGLGGCNVDGAADPQASIGEVRRKAPWKRWRKPVKARSLKSLM

Nucleotide Sequence
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CCCGTCACCCTCTCTCGTTCATTTT...

Zm00001d032837_T001 from maize genome v4

Amino Acid Sequence
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MRIRKSASRLLGSAYSASAAPTVDAAPRLDLLPPPHPAPCSAPESCGGSAFSSPSVSTAEPCELSRSPWDLIADLSLSDK
KVEDELVDKYFVHVTTRASWLFSSTVSATTSTKKKKKLPAAVYEDSTQLRREAAKKTATNREEGETKKKAKVKKEEVQQD
GAAAAAAQVWKCKKNDGRRWHCNRPVSQPNTLCEYHFVQKRSYLNPGFEFHSTAELEGAAPAPAPVHAASSKLSTSNKPR
KKKKPGNDFSATEGFYYYAGFGPFRTKRQCRSGGTNEPLPAKQEEEEETPEYASHHTEEEEKEAKVAGFTNQAASQDDVS
SCDDDIAGIAGVDEESSDGDYDGIGLGGCNVDGAADPQASIGEVRRKAPWKRWRKPVKARSLKSLM

Nucleotide Sequence
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ACCCGTCACCCTCTCTCGTTCATTT...

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Protein ZmOrphan105

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmOrphan105 is the regulator

Interactions where ZmOrphan105 is the target
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Zm00001eb047020_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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GRMZM2G001592_T01 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Zm00001d032837_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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